Apply-Extend 2 January 22-24 From Jan 22 lecture * In normal meiosis, the chromosomes separate from each other as they go into the gametes. Members of the same homologous pair separate at the end of Meiosis I. The twin chromatids separate from each other at the end of Meiosis II. What results if there is non-disjunction = failure of chromosomes (either a homologous pair or twin chromatids) to move apart during meiosis? aneuploidy ”not good ploidy” = abnormal chromosome number AE 2. Relevant learning outcomes (from 2/22 lecture) 1-16. What is aneuploidy? What is trisomy 21? 1-17. What is the genetic (chromosomal) basis of sex determination (male or female) in placental mammals? 1-18. Given information about parental phenotypes for an X-linked recessive trait, draw a Punnett Square (including X and Y chromosomes) and predict the percentage or fraction of (a) all their offspring and (b) their sons that would express the recessive trait in their phenotype. self-check: what is an example of epigenetic “marking”? 1 2 Trisomy 21 Down Syndrome Review the normal chromosome movements during meiosis –> Match the non-disjunction event with the resulting number of chromosomes in the daughter cells resulting from meiosis. Human example, n = 23. From Jan 22 lecture LO. 1-16. What is trisomy 21? (Down Syndrome phenotype) 3 copies of chromosome 21, not a pair, in this person’s genome; how many chromosomes total? (a) 4 daughter cells contain. 22, 22, 24, 24 (b) 4 daughter cells contain 23, 23, 23, 23 (c) 4 daughter cells contain 23, 23, 22, 24 A person with Trisomy 21 results from the fertilization of a gamete with the normal number of chromosomes (23) with a gamete having an extra chromosome (24). In most trisomies, individuals die very early in embryonic development. Trisomy 21 individuals are the exception. The second most common trisomy observed in human fetuses is Trisomy 18, the fatal Edwards Syndrome. 3 1____no nondisjunction in meiosis 2.____one nondisjunction event in the first meiotic division 3.____one nondisjunction event in the second meiotic division Explain how a child with Down Syndrome could develop? [not just the gamete] 4 Skill: Predict offspring genotypes & phenotypes for X-linked traits using a Punnett square. Punnett Squares for X-linked traits must show X and Y as well as the X-linked alleles (H/h) Trisomy is when there are 3 chromosomes instead of 2 in a homologous pair (there’s an extra chromosome in the individual’s genome.) e.g. a human trisomy individual has __ chromosomes. (23, 24, 46, 47?) Polyploidy is when there are multiple (duplicate or triplicate) copies of ALL the chromosomes in the genome. e.g., if there were such thing as a polyploid human (there’s not!), that individual could have ____ chromosomes. 46, 47, 92 this is an extra slide from 1/22 lecture more later in the semester about polyploidy 5 6 1 Practice Punnett square for X-linked traits. 5. A man with red-green color blindness (a recessive, X-linked trait) marries a woman with normal vision whose father was color-blind. From the Punnett Square tell what is the probability that their first child will be (a) a color-blind daughter? (b) a color-blind son? [each birth is independent] A. 0, 1/4 B. 1/4, 1/4 C. 1/2, 1/4 D. 1/4, 1/2 E. 1/4, 0 4. A woman is heterozygous for the recessive X-linked gene for Duchenne Muscular Dystrophy (DMD). Her husband is not affected by DMD. What are the parent genotypes (with X and Y chromosomes)? Draw the Punnett Square for this mating. (a) What proportion of their sons will have DMD? (b) What proportion of their daughters will be carriers for the DMD allele? 7 8 Epigenetic inheritance. Epigenetic inheritance. [slides will be in 1/22 lecture] (p. 315) Inheritance of traits transmitted by mechanisms NOT involving the nucleotide sequence are called epigenetic inheritance. Because genetically identical twins can accumulate different epigenetic markings over time, they can express genes differently. Many quite normal developmental processes require epigenetic marking. Epigenetic mechanisms DNA methylation histone acetylation are normal methods of control of gene expression —remember from BIO 311C? However, there are external, non-normal factors contributing to epigenetic change in individuals: environmental chemicals, diet, and lifestyle factors. We also know epigenetics plays a role in aging and cancer. Whereas mutations in DNA are permanent, modifications to the chromatin can be reversed. For example, DNA methylation patterns in the parent chromosomes are largely erased during gamete formation, then re-established. Important: epigenetic ”marking’ affects gene expression but does not change the gene itself. 9 A large-scale example of normal epigenetic marking happens in X-chromosome inactivation, initially from some short, non-coding RNAs, but then by long-term by DNA methylation all over one of the X chromosomes. 10 Example (Instapoll in 1/22 lecture) 2.5 In embryos that are exposed to alcohol during development, some genes are turned off epigenetically. Which would be an example? A. alcohol causes a mutation in the base sequence B. alcohol triggers DNA methylation of a base sequence C. alcohol inactivates important enzymes in the cytoplasm D. two of these would be epigenetic changes Do you understand epigenetics? 11 [slide will be in 1/22 lecture] X chromosome inactivation occurs in female mammals at a time when the embryo is composed of a few cells. Inactivation is random, in the sense that either the maternal X or the paternal X can be inactivated initially in any given cell. All daughter cells have the same inactivated X. Thus, the body of an XX female develops as a genetic mosaic in which some tissues express the maternal X chromosome and other Gene EXPRESSION tissues express the paternal X. difference, not inheritance 12 2 Black and Orange alleles are co-dominant at the same locus on the X chromosome. X inactivation happens in any mammal that has more than one X chromosome A cell producing black fur contains: A. only genes for black fur B. active gene for black fur; inactive gene for orange fur; C. only genes for orange fur 13 The inactive X shows up under a microscope as a Barr body. stained nucleus with one Barr body Gene EXPRESSION difference, not inheritance END OF WED 1/22 lecture ONLY IF TIME--What could be the evolutionary advantage of X inactivation in mammals??? 14 AE2 #1. A woman with blood type A gave birth to a child with blood type AB. It is uncertain which of three men is the father of the child. Person X has blood type A, person Y has blood type O, and person Z, has blood type B. Can one or more of these men (X, Y, Z) be eliminated as the father of the child based on ABO blood group data? A. only Person X can be eliminated B. only Person Y can be eliminated C. only Person Z can be eliminated D. Persons X and Y can be eliminated E. Persons X and Z can be eliminated F. Persons Y and Z can be eliminated 15 Modified from text p. 238, #6 AE2 #2. Hemochromatosis is an inherited disease caused by a recessive allele (not sex-linked). If a woman and her husband, who are both heterozygous carriers, have three children, what is the probability that all three children have hemochromatosis? A. 0 B. 1/64 C. 1/16 D. 1/8 E. 1/4 16 AE3 #3 A woman is heterozygous for the recessive X-linked gene for hemophilia. Her husband is not affected by hemophilia. Determine the the parent genotypes (with X and Y chromosomes), and draw the Punnett Square for this mating. AE2 #4. If a baby girl was born color-blind, which of the following can be assumed to be true about her parents’ phenotype? What proportion of their sons will have hemophilia? A. 0 (none) B. 1/4 A. Both of her parents must be color-blind B. Her father must be color-blind C. Her mother must be color-blind D. None of these above about her parents’ phenotype can be assumed C. 1/2 D. 3/4 E. 1 (all) 17 How many Barr bodies in: XX individual? XY individual? XXX individual? XXY individual? 18 3 AE2 Q5. Very few protein-coding genes are on the Y chromosomes, and there is virtually no crossing-over between X and Y. Y-linked genes include the sry gene that expresses the testis-differentiation protein and determines male development. A male with this gene will A. usually pass it to his sons, but about 10% of the time also pass it to a daughter B. only pass the gene to his sons C. only pass the gene to his daughters D. only pass the gene to his grandsons, not sons E. pass the gene to all of his children if the mother is a carrier. 19 AE2. Q6. Why do X-linked recessive traits appear in the phenotype of males more than in females? A. Males always carry more recessive traits B. Males inherit more recessive traits from their mothers than females do. C. Males inherit more recessive traits from their fathers than females do. D. Females have two X chromosomes so if one has a recessive gene a normal allele on the other X chromosome can be expressed. 20 4